Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp3Q91W36 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp3Q91W36 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp3Q91W36 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.31□□□□□ -0.28
Usp3Q91W36 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Usp3Q91W36 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.31□□□□□ -0.28
Usp3Q91W36 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.31□□□□□ -0.28
Usp3Q91W36 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp3Q91W36 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.31□□□□□ -0.28
Usp3Q91W36 Gm3890-201ENSMUST00000182416 207 ntBASIC13.31□□□□□ -0.28
Usp3Q91W36 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Gm43118-201ENSMUST00000199149 775 ntBASIC13.31□□□□□ -0.28
Usp3Q91W36 Gm18584-201ENSMUST00000203098 964 ntBASIC13.31□□□□□ -0.28
Usp3Q91W36 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Usp3Q91W36 Gm19540-201ENSMUST00000221843 810 ntBASIC13.31□□□□□ -0.28
Usp3Q91W36 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.31□□□□□ -0.28
Usp3Q91W36 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Usp3Q91W36 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp3Q91W36 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Usp3Q91W36 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Usp3Q91W36 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Usp3Q91W36 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.31□□□□□ -0.28
Usp3Q91W36 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp3Q91W36 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Usp3Q91W36 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.3□□□□□ -0.28
Usp3Q91W36 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.3□□□□□ -0.28
Usp3Q91W36 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Usp3Q91W36 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.3□□□□□ -0.28
Usp3Q91W36 Gm15968-201ENSMUST00000119342 1168 ntBASIC13.3□□□□□ -0.28
Usp3Q91W36 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Usp3Q91W36 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Usp3Q91W36 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.3□□□□□ -0.28
Usp3Q91W36 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.3□□□□□ -0.28
Usp3Q91W36 Gm37641-201ENSMUST00000193837 239 ntBASIC13.3□□□□□ -0.28
Usp3Q91W36 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Gm43133-201ENSMUST00000197472 463 ntBASIC13.3□□□□□ -0.28
Usp3Q91W36 Gm43066-201ENSMUST00000199589 1260 ntBASIC13.3□□□□□ -0.28
Usp3Q91W36 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.3□□□□□ -0.28
Usp3Q91W36 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp3Q91W36 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.3□□□□□ -0.28
Usp3Q91W36 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Gm9823-201ENSMUST00000051212 327 ntBASIC13.3□□□□□ -0.28
Usp3Q91W36 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.3□□□□□ -0.28
Usp3Q91W36 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp3Q91W36 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp3Q91W36 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.3□□□□□ -0.28
Usp3Q91W36 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp3Q91W36 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.3□□□□□ -0.28
Usp3Q91W36 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp3Q91W36 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms