Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.74□□□□□ -0.21
TraipQ8VIG6 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Gm11531-201ENSMUST00000117614 555 ntBASIC13.73□□□□□ -0.21
TraipQ8VIG6 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.73□□□□□ -0.21
TraipQ8VIG6 Gm31256-201ENSMUST00000194705 506 ntBASIC13.73□□□□□ -0.21
TraipQ8VIG6 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Gm13097-201ENSMUST00000210722 397 ntBASIC13.73□□□□□ -0.21
TraipQ8VIG6 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.73□□□□□ -0.21
TraipQ8VIG6 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.73□□□□□ -0.21
TraipQ8VIG6 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC13.73□□□□□ -0.21
TraipQ8VIG6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TraipQ8VIG6 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TraipQ8VIG6 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC13.72□□□□□ -0.21
TraipQ8VIG6 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TraipQ8VIG6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Gm15968-201ENSMUST00000119342 1168 ntBASIC13.72□□□□□ -0.21
TraipQ8VIG6 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.72□□□□□ -0.21
TraipQ8VIG6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.72□□□□□ -0.21
TraipQ8VIG6 Gm44405-201ENSMUST00000198952 126 ntBASIC13.72□□□□□ -0.21
TraipQ8VIG6 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.72□□□□□ -0.21
TraipQ8VIG6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TraipQ8VIG6 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms