Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh18Q8VHR0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh18Q8VHR0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Gm15240-201ENSMUST00000118156 720 ntBASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Gm44872-201ENSMUST00000207864 420 ntBASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Gm17795-201ENSMUST00000214505 757 ntBASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh18Q8VHR0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh18Q8VHR0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms