Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.51□□□□□ -0.09
Syne4Q8CII8 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Gm27627-201ENSMUST00000183644 150 ntBASIC14.51□□□□□ -0.09
Syne4Q8CII8 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Syne4Q8CII8 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Gm15131-201ENSMUST00000119124 595 ntBASIC14.5□□□□□ -0.09
Syne4Q8CII8 Gm13408-201ENSMUST00000119822 798 ntBASIC14.5□□□□□ -0.09
Syne4Q8CII8 Gm13935-201ENSMUST00000121859 798 ntBASIC14.5□□□□□ -0.09
Syne4Q8CII8 Gm14665-201ENSMUST00000122294 557 ntBASIC14.5□□□□□ -0.09
Syne4Q8CII8 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.5□□□□□ -0.09
Syne4Q8CII8 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.5□□□□□ -0.09
Syne4Q8CII8 Gm39404-201ENSMUST00000216350 313 ntBASIC14.5□□□□□ -0.09
Syne4Q8CII8 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.5□□□□□ -0.09
Syne4Q8CII8 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Gm10076-201ENSMUST00000073238 384 ntBASIC14.5□□□□□ -0.09
Syne4Q8CII8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Syne4Q8CII8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Gm15711-201ENSMUST00000118889 535 ntBASIC14.49□□□□□ -0.09
Syne4Q8CII8 Gm12380-201ENSMUST00000119012 544 ntBASIC14.49□□□□□ -0.09
Syne4Q8CII8 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Gm19187-201ENSMUST00000206781 892 ntBASIC14.49□□□□□ -0.09
Syne4Q8CII8 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Syne4Q8CII8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms