Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Aph1bQ8C7N7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Aph1bQ8C7N7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Aph1bQ8C7N7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Aph1bQ8C7N7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.72□□□□□ -0.37
Aph1bQ8C7N7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.72□□□□□ -0.37
Aph1bQ8C7N7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.72□□□□□ -0.37
Aph1bQ8C7N7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.72□□□□□ -0.37
Aph1bQ8C7N7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Aph1bQ8C7N7 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.72□□□□□ -0.37
Aph1bQ8C7N7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Aph1bQ8C7N7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Gm8805-201ENSMUST00000117848 313 ntBASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Aph1bQ8C7N7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
Aph1bQ8C7N7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Aph1bQ8C7N7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Aph1bQ8C7N7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Aph1bQ8C7N7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Aph1bQ8C7N7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Aph1bQ8C7N7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Aph1bQ8C7N7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Aph1bQ8C7N7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Aph1bQ8C7N7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Aph1bQ8C7N7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Aph1bQ8C7N7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Gm14704-201ENSMUST00000120300 874 ntBASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Gm28911-201ENSMUST00000188837 117 ntBASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Aph1bQ8C7N7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms