Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gm15376-201ENSMUST00000122258 783 ntBASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Gm23984-201ENSMUST00000157139 203 ntBASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Gm28631-201ENSMUST00000190740 334 ntBASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Gm6745-201ENSMUST00000199216 526 ntBASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Gm5279-201ENSMUST00000199575 745 ntBASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps9d1Q8C190 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Gm8515-201ENSMUST00000194852 576 ntBASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.07□□□□□ -0.48
Vps9d1Q8C190 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Gm6180-201ENSMUST00000065243 498 ntBASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.07□□□□□ -0.48
Vps9d1Q8C190 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Gm26464-201ENSMUST00000157094 305 ntBASIC12.06□□□□□ -0.48
Vps9d1Q8C190 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps9d1Q8C190 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms