Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Gm4875-201ENSMUST00000118257 786 ntBASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Gm37751-201ENSMUST00000192440 1198 ntBASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Gm44607-201ENSMUST00000205611 1090 ntBASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Gm6888-201ENSMUST00000221983 706 ntBASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Gm5161-201ENSMUST00000075243 853 ntBASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Gm8581-201ENSMUST00000188636 890 ntBASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.07□□□□□ -0.64
Lsm11Q8BUV6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms