Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp54Q8BL06 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp54Q8BL06 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp54Q8BL06 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Usp54Q8BL06 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Usp54Q8BL06 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Usp54Q8BL06 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Usp54Q8BL06 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Usp54Q8BL06 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Usp54Q8BL06 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Usp54Q8BL06 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC17.96■□□□□ 0.46
Usp54Q8BL06 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Usp54Q8BL06 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Usp54Q8BL06 Gm10774-201ENSMUST00000188689 204 ntBASIC17.96■□□□□ 0.46
Usp54Q8BL06 Gm5733-201ENSMUST00000190232 939 ntBASIC17.96■□□□□ 0.46
Usp54Q8BL06 Gm43184-201ENSMUST00000197247 542 ntBASIC17.96■□□□□ 0.46
Usp54Q8BL06 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC17.96■□□□□ 0.46
Usp54Q8BL06 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC17.96■□□□□ 0.46
Usp54Q8BL06 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp54Q8BL06 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC17.95■□□□□ 0.46
Usp54Q8BL06 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Gm10176-201ENSMUST00000159707 2264 ntBASIC17.95■□□□□ 0.46
Usp54Q8BL06 Gm42840-201ENSMUST00000200303 2251 ntBASIC17.95■□□□□ 0.46
Usp54Q8BL06 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Gm23085-201ENSMUST00000157849 293 ntBASIC17.95■□□□□ 0.46
Usp54Q8BL06 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp54Q8BL06 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp54Q8BL06 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Usp54Q8BL06 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC17.94■□□□□ 0.46
Usp54Q8BL06 Gm14665-201ENSMUST00000122294 557 ntBASIC17.94■□□□□ 0.46
Usp54Q8BL06 Gm15881-201ENSMUST00000148792 942 ntBASIC17.94■□□□□ 0.46
Usp54Q8BL06 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp54Q8BL06 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp54Q8BL06 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Gm7722-201ENSMUST00000120646 741 ntBASIC17.93■□□□□ 0.46
Usp54Q8BL06 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Gm8343-201ENSMUST00000182705 994 ntBASIC17.93■□□□□ 0.46
Usp54Q8BL06 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Gm43830-201ENSMUST00000198760 1067 ntBASIC17.93■□□□□ 0.46
Usp54Q8BL06 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Gm7600-201ENSMUST00000209657 785 ntBASIC17.93■□□□□ 0.46
Usp54Q8BL06 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC17.93■□□□□ 0.46
Usp54Q8BL06 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Gm5385-201ENSMUST00000118988 1559 ntBASIC17.93■□□□□ 0.46
Usp54Q8BL06 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp54Q8BL06 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp54Q8BL06 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Usp54Q8BL06 Gm11628-201ENSMUST00000117568 171 ntBASIC17.92■□□□□ 0.46
Usp54Q8BL06 Selenot-ps-201ENSMUST00000119098 593 ntBASIC17.92■□□□□ 0.46
Usp54Q8BL06 Gm14460-201ENSMUST00000121511 639 ntBASIC17.92■□□□□ 0.46
Usp54Q8BL06 Gm12164-201ENSMUST00000121695 551 ntBASIC17.92■□□□□ 0.46
Usp54Q8BL06 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC17.92■□□□□ 0.46
Usp54Q8BL06 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Usp54Q8BL06 Ighv4-2-201ENSMUST00000192975 362 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms