Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.74□□□□□ -0.37
Ubp1Q811S7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC12.74□□□□□ -0.37
Ubp1Q811S7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Gm43818-201ENSMUST00000200605 466 ntBASIC12.74□□□□□ -0.37
Ubp1Q811S7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 CT010431.1-201ENSMUST00000221249 1080 ntBASIC12.74□□□□□ -0.37
Ubp1Q811S7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Gm25857-201ENSMUST00000082788 129 ntBASIC12.74□□□□□ -0.37
Ubp1Q811S7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.73□□□□□ -0.37
Ubp1Q811S7 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.73□□□□□ -0.37
Ubp1Q811S7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.73□□□□□ -0.37
Ubp1Q811S7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Gm26185-201ENSMUST00000157692 266 ntBASIC12.73□□□□□ -0.37
Ubp1Q811S7 Gm27731-201ENSMUST00000185192 107 ntBASIC12.73□□□□□ -0.37
Ubp1Q811S7 Gm8502-201ENSMUST00000185708 901 ntBASIC12.73□□□□□ -0.37
Ubp1Q811S7 Gm21147-201ENSMUST00000186046 913 ntBASIC12.73□□□□□ -0.37
Ubp1Q811S7 Gm8510-201ENSMUST00000189202 895 ntBASIC12.73□□□□□ -0.37
Ubp1Q811S7 Gm2316-201ENSMUST00000190613 921 ntBASIC12.73□□□□□ -0.37
Ubp1Q811S7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Gm43084-201ENSMUST00000200696 947 ntBASIC12.73□□□□□ -0.37
Ubp1Q811S7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.73□□□□□ -0.37
Ubp1Q811S7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.73□□□□□ -0.37
Ubp1Q811S7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubp1Q811S7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.72□□□□□ -0.37
Ubp1Q811S7 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubp1Q811S7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ubp1Q811S7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.72□□□□□ -0.37
Ubp1Q811S7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.72□□□□□ -0.37
Ubp1Q811S7 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Gm2231-201ENSMUST00000125661 612 ntBASIC12.72□□□□□ -0.37
Ubp1Q811S7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.72□□□□□ -0.37
Ubp1Q811S7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.72□□□□□ -0.37
Ubp1Q811S7 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms