Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm4Q6IRU2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Gm15371-201ENSMUST00000117057 784 ntBASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Gm38223-201ENSMUST00000194484 695 ntBASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Gm26315-201ENSMUST00000083890 321 ntBASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm4Q6IRU2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm4Q6IRU2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm4Q6IRU2 Gm26684-202ENSMUST00000228229 8257 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms