Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SspnQ62147 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SspnQ62147 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SspnQ62147 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SspnQ62147 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SspnQ62147 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SspnQ62147 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SspnQ62147 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SspnQ62147 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SspnQ62147 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SspnQ62147 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SspnQ62147 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SspnQ62147 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SspnQ62147 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
SspnQ62147 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
SspnQ62147 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SspnQ62147 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Gm6447-201ENSMUST00000118905 835 ntBASIC10.81□□□□□ -0.68
SspnQ62147 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.81□□□□□ -0.68
SspnQ62147 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Gm5626-201ENSMUST00000222151 1058 ntBASIC10.81□□□□□ -0.68
SspnQ62147 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Gm2423-201ENSMUST00000074863 733 ntBASIC10.81□□□□□ -0.68
SspnQ62147 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
SspnQ62147 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.81□□□□□ -0.68
SspnQ62147 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
SspnQ62147 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.81□□□□□ -0.68
SspnQ62147 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SspnQ62147 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SspnQ62147 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.8□□□□□ -0.68
SspnQ62147 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SspnQ62147 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
SspnQ62147 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.8□□□□□ -0.68
SspnQ62147 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.8□□□□□ -0.68
SspnQ62147 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.8□□□□□ -0.68
SspnQ62147 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SspnQ62147 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.8□□□□□ -0.68
SspnQ62147 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.8□□□□□ -0.68
SspnQ62147 Mir6392-201ENSMUST00000184924 108 ntBASIC10.8□□□□□ -0.68
SspnQ62147 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
SspnQ62147 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.8□□□□□ -0.68
SspnQ62147 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.8□□□□□ -0.68
SspnQ62147 AC158982.1-201ENSMUST00000228377 901 ntBASIC10.8□□□□□ -0.68
SspnQ62147 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
SspnQ62147 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
SspnQ62147 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.8□□□□□ -0.68
SspnQ62147 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SspnQ62147 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms