Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.4□□□□□ -0.26
Smarcd1Q61466 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Gm10434-201ENSMUST00000101158 471 ntBASIC13.4□□□□□ -0.26
Smarcd1Q61466 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Smarcd1Q61466 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Gm38266-201ENSMUST00000194931 421 ntBASIC13.4□□□□□ -0.26
Smarcd1Q61466 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Gm7046-201ENSMUST00000221351 977 ntBASIC13.4□□□□□ -0.26
Smarcd1Q61466 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.4□□□□□ -0.26
Smarcd1Q61466 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Smarcd1Q61466 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Smarcd1Q61466 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.39□□□□□ -0.27
Smarcd1Q61466 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Gm27516-201ENSMUST00000184237 98 ntBASIC13.39□□□□□ -0.27
Smarcd1Q61466 Gm37489-201ENSMUST00000191883 159 ntBASIC13.39□□□□□ -0.27
Smarcd1Q61466 Gm10608-202ENSMUST00000213924 676 ntBASIC13.39□□□□□ -0.27
Smarcd1Q61466 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.39□□□□□ -0.27
Smarcd1Q61466 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.39□□□□□ -0.27
Smarcd1Q61466 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.39□□□□□ -0.27
Smarcd1Q61466 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Smarcd1Q61466 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Gm12241-201ENSMUST00000118330 726 ntBASIC13.38□□□□□ -0.27
Smarcd1Q61466 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Mir8109-201ENSMUST00000184375 117 ntBASIC13.38□□□□□ -0.27
Smarcd1Q61466 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Gm9368-201ENSMUST00000219348 831 ntBASIC13.38□□□□□ -0.27
Smarcd1Q61466 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.38□□□□□ -0.27
Smarcd1Q61466 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd1Q61466 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.38□□□□□ -0.27
Smarcd1Q61466 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms