Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn4Q3UWL8 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Pfdn4Q3UWL8 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn4Q3UWL8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.65□□□□□ -0.38
Pfdn4Q3UWL8 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn4Q3UWL8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn4Q3UWL8 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn4Q3UWL8 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn4Q3UWL8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Pfdn4Q3UWL8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Gm15920-201ENSMUST00000118998 402 ntBASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Gm26464-201ENSMUST00000157094 305 ntBASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn4Q3UWL8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Mir7684-201ENSMUST00000183858 60 ntBASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pfdn4Q3UWL8 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms