Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcr5Q04683 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcr5Q04683 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcr5Q04683 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Cxcr5Q04683 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcr5Q04683 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.25□□□□□ -0.45
Cxcr5Q04683 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.25□□□□□ -0.45
Cxcr5Q04683 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcr5Q04683 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcr5Q04683 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcr5Q04683 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Gm13813-201ENSMUST00000120998 787 ntBASIC12.24□□□□□ -0.45
Cxcr5Q04683 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.24□□□□□ -0.45
Cxcr5Q04683 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.24□□□□□ -0.45
Cxcr5Q04683 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcr5Q04683 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.23□□□□□ -0.45
Cxcr5Q04683 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Gm12341-201ENSMUST00000119724 503 ntBASIC12.23□□□□□ -0.45
Cxcr5Q04683 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.23□□□□□ -0.45
Cxcr5Q04683 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.23□□□□□ -0.45
Cxcr5Q04683 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.23□□□□□ -0.45
Cxcr5Q04683 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.23□□□□□ -0.45
Cxcr5Q04683 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.23□□□□□ -0.45
Cxcr5Q04683 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Gm5867-201ENSMUST00000063197 592 ntBASIC12.23□□□□□ -0.45
Cxcr5Q04683 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cxcr5Q04683 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cxcr5Q04683 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcr5Q04683 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcr5Q04683 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcr5Q04683 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.22□□□□□ -0.45
Cxcr5Q04683 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcr5Q04683 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcr5Q04683 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.22□□□□□ -0.45
Cxcr5Q04683 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Cxcr5Q04683 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcr5Q04683 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcr5Q04683 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcr5Q04683 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.22□□□□□ -0.45
Cxcr5Q04683 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcr5Q04683 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms