Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.77□□□□□ -0.53
Scn1bP97952 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.76□□□□□ -0.53
Scn1bP97952 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Scn1bP97952 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.76□□□□□ -0.53
Scn1bP97952 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Scn1bP97952 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.76□□□□□ -0.53
Scn1bP97952 Gm2756-201ENSMUST00000195851 400 ntBASIC11.76□□□□□ -0.53
Scn1bP97952 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.76□□□□□ -0.53
Scn1bP97952 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.76□□□□□ -0.53
Scn1bP97952 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.76□□□□□ -0.53
Scn1bP97952 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Scn1bP97952 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Scn1bP97952 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Scn1bP97952 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.76□□□□□ -0.53
Scn1bP97952 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.76□□□□□ -0.53
Scn1bP97952 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.76□□□□□ -0.53
Scn1bP97952 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn1bP97952 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.75□□□□□ -0.53
Scn1bP97952 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Scn1bP97952 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Scn1bP97952 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Scn1bP97952 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.75□□□□□ -0.53
Scn1bP97952 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.75□□□□□ -0.53
Scn1bP97952 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Gm6736-201ENSMUST00000166583 948 ntBASIC11.75□□□□□ -0.53
Scn1bP97952 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.75□□□□□ -0.53
Scn1bP97952 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.75□□□□□ -0.53
Scn1bP97952 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.75□□□□□ -0.53
Scn1bP97952 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.75□□□□□ -0.53
Scn1bP97952 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Scn1bP97952 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.75□□□□□ -0.53
Scn1bP97952 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Scn1bP97952 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Scn1bP97952 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scn1bP97952 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.75□□□□□ -0.53
Scn1bP97952 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.75□□□□□ -0.53
Scn1bP97952 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn1bP97952 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Scn1bP97952 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scn1bP97952 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scn1bP97952 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Scn1bP97952 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms