Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Thumpd3P97770 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.12□□□□□ -0.31
Thumpd3P97770 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.12□□□□□ -0.31
Thumpd3P97770 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Thumpd3P97770 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.12□□□□□ -0.31
Thumpd3P97770 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Thumpd3P97770 Gm4984-201ENSMUST00000115987 360 ntBASIC13.12□□□□□ -0.31
Thumpd3P97770 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Thumpd3P97770 Gm6266-201ENSMUST00000203844 806 ntBASIC13.12□□□□□ -0.31
Thumpd3P97770 Gm5356-201ENSMUST00000093326 615 ntBASIC13.12□□□□□ -0.31
Thumpd3P97770 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.12□□□□□ -0.31
Thumpd3P97770 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.12□□□□□ -0.31
Thumpd3P97770 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Thumpd3P97770 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Thumpd3P97770 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Thumpd3P97770 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.11□□□□□ -0.31
Thumpd3P97770 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.11□□□□□ -0.31
Thumpd3P97770 Gm17150-201ENSMUST00000165577 381 ntBASIC13.11□□□□□ -0.31
Thumpd3P97770 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Gm5035-201ENSMUST00000215581 927 ntBASIC13.11□□□□□ -0.31
Thumpd3P97770 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.11□□□□□ -0.31
Thumpd3P97770 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd3P97770 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.1□□□□□ -0.31
Thumpd3P97770 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Thumpd3P97770 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.1□□□□□ -0.31
Thumpd3P97770 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
Thumpd3P97770 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Thumpd3P97770 Gm19931-201ENSMUST00000198920 368 ntBASIC13.1□□□□□ -0.31
Thumpd3P97770 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.1□□□□□ -0.31
Thumpd3P97770 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.1□□□□□ -0.31
Thumpd3P97770 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.1□□□□□ -0.31
Thumpd3P97770 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Thumpd3P97770 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Thumpd3P97770 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd3P97770 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms