Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh6P97326 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh6P97326 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.05□□□□□ -0.32
Cdh6P97326 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.05□□□□□ -0.32
Cdh6P97326 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cdh6P97326 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh6P97326 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh6P97326 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cdh6P97326 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.05□□□□□ -0.32
Cdh6P97326 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Cdh6P97326 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cdh6P97326 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdh6P97326 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Snord83b-201ENSMUST00000104546 94 ntBASIC13.04□□□□□ -0.32
Cdh6P97326 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.04□□□□□ -0.32
Cdh6P97326 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cdh6P97326 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cdh6P97326 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cdh6P97326 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdh6P97326 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh6P97326 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.04□□□□□ -0.32
Cdh6P97326 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Cdh6P97326 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdh6P97326 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdh6P97326 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 Gm11425-201ENSMUST00000119608 498 ntBASIC13.03□□□□□ -0.32
Cdh6P97326 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.03□□□□□ -0.32
Cdh6P97326 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.03□□□□□ -0.32
Cdh6P97326 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdh6P97326 Gm32025-201ENSMUST00000217960 307 ntBASIC13.03□□□□□ -0.32
Cdh6P97326 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 Gm9396-201ENSMUST00000076703 567 ntBASIC13.03□□□□□ -0.32
Cdh6P97326 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdh6P97326 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Cdh6P97326 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdh6P97326 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Cdh6P97326 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cdh6P97326 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.03□□□□□ -0.32
Cdh6P97326 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh6P97326 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh6P97326 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh6P97326 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh6P97326 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh6P97326 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cdh6P97326 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh6P97326 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh6P97326 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh6P97326 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh6P97326 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh6P97326 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh6P97326 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh6P97326 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdh6P97326 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cdh6P97326 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdh6P97326 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh6P97326 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh6P97326 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cdh6P97326 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms