Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ldb1P70662 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Ldb1P70662 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.82□□□□□ -0.36
Ldb1P70662 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.82□□□□□ -0.36
Ldb1P70662 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ldb1P70662 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ldb1P70662 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb1P70662 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.81□□□□□ -0.36
Ldb1P70662 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb1P70662 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Ldb1P70662 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb1P70662 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb1P70662 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb1P70662 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb1P70662 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb1P70662 Gm11478-201ENSMUST00000117851 599 ntBASIC12.81□□□□□ -0.36
Ldb1P70662 Gm11814-201ENSMUST00000119515 929 ntBASIC12.81□□□□□ -0.36
Ldb1P70662 Gm16479-201ENSMUST00000121706 932 ntBASIC12.81□□□□□ -0.36
Ldb1P70662 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.81□□□□□ -0.36
Ldb1P70662 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.81□□□□□ -0.36
Ldb1P70662 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Ldb1P70662 Gm27486-201ENSMUST00000184923 80 ntBASIC12.81□□□□□ -0.36
Ldb1P70662 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.81□□□□□ -0.36
Ldb1P70662 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb1P70662 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb1P70662 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb1P70662 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ldb1P70662 Gm10146-201ENSMUST00000072739 309 ntBASIC12.81□□□□□ -0.36
Ldb1P70662 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Ldb1P70662 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Ldb1P70662 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb1P70662 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb1P70662 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.81□□□□□ -0.36
Ldb1P70662 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb1P70662 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.81□□□□□ -0.36
Ldb1P70662 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb1P70662 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.81□□□□□ -0.36
Ldb1P70662 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb1P70662 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.81□□□□□ -0.36
Ldb1P70662 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.8□□□□□ -0.36
Ldb1P70662 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ldb1P70662 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ldb1P70662 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.8□□□□□ -0.36
Ldb1P70662 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ldb1P70662 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.8□□□□□ -0.36
Ldb1P70662 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.8□□□□□ -0.36
Ldb1P70662 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.8□□□□□ -0.36
Ldb1P70662 Gm37497-201ENSMUST00000195830 798 ntBASIC12.8□□□□□ -0.36
Ldb1P70662 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.8□□□□□ -0.36
Ldb1P70662 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Gm6091-201ENSMUST00000098307 165 ntBASIC12.8□□□□□ -0.36
Ldb1P70662 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ldb1P70662 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ldb1P70662 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.8□□□□□ -0.36
Ldb1P70662 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.8□□□□□ -0.36
Ldb1P70662 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ldb1P70662 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb1P70662 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ldb1P70662 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ldb1P70662 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Ldb1P70662 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.79□□□□□ -0.36
Ldb1P70662 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb1P70662 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms