Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six5P70178 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Six5P70178 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.06□□□□□ -0.48
Six5P70178 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.06□□□□□ -0.48
Six5P70178 Gm12390-201ENSMUST00000117897 397 ntBASIC12.06□□□□□ -0.48
Six5P70178 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.06□□□□□ -0.48
Six5P70178 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.06□□□□□ -0.48
Six5P70178 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.06□□□□□ -0.48
Six5P70178 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Six5P70178 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Gm22121-201ENSMUST00000175148 54 ntBASIC12.06□□□□□ -0.48
Six5P70178 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.06□□□□□ -0.48
Six5P70178 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.06□□□□□ -0.48
Six5P70178 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.06□□□□□ -0.48
Six5P70178 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.06□□□□□ -0.48
Six5P70178 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.06□□□□□ -0.48
Six5P70178 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Six5P70178 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six5P70178 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Six5P70178 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Six5P70178 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.05□□□□□ -0.48
Six5P70178 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Six5P70178 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Six5P70178 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Gm13813-201ENSMUST00000120998 787 ntBASIC12.05□□□□□ -0.48
Six5P70178 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Six5P70178 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.05□□□□□ -0.48
Six5P70178 Gm8602-201ENSMUST00000184045 607 ntBASIC12.05□□□□□ -0.48
Six5P70178 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.05□□□□□ -0.48
Six5P70178 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.05□□□□□ -0.48
Six5P70178 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Six5P70178 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Six5P70178 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.05□□□□□ -0.48
Six5P70178 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.05□□□□□ -0.48
Six5P70178 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.05□□□□□ -0.48
Six5P70178 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Six5P70178 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Six5P70178 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Six5P70178 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.04□□□□□ -0.48
Six5P70178 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six5P70178 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six5P70178 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six5P70178 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six5P70178 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six5P70178 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Six5P70178 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six5P70178 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Six5P70178 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms