Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.37□□□□□ -0.59
Sec61a1P61620 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Sec61a1P61620 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.36□□□□□ -0.59
Sec61a1P61620 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Mir874-201ENSMUST00000104769 76 ntBASIC11.36□□□□□ -0.59
Sec61a1P61620 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
Sec61a1P61620 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.36□□□□□ -0.59
Sec61a1P61620 Gm15376-201ENSMUST00000122258 783 ntBASIC11.36□□□□□ -0.59
Sec61a1P61620 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.36□□□□□ -0.59
Sec61a1P61620 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.36□□□□□ -0.59
Sec61a1P61620 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.36□□□□□ -0.59
Sec61a1P61620 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.36□□□□□ -0.59
Sec61a1P61620 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.36□□□□□ -0.59
Sec61a1P61620 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.36□□□□□ -0.59
Sec61a1P61620 Gm43094-201ENSMUST00000196549 921 ntBASIC11.36□□□□□ -0.59
Sec61a1P61620 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.36□□□□□ -0.59
Sec61a1P61620 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.36□□□□□ -0.59
Sec61a1P61620 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.36□□□□□ -0.59
Sec61a1P61620 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.36□□□□□ -0.59
Sec61a1P61620 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.36□□□□□ -0.59
Sec61a1P61620 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.36□□□□□ -0.59
Sec61a1P61620 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.36□□□□□ -0.59
Sec61a1P61620 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
Sec61a1P61620 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sec61a1P61620 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61a1P61620 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.35□□□□□ -0.59
Sec61a1P61620 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.35□□□□□ -0.59
Sec61a1P61620 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.35□□□□□ -0.59
Sec61a1P61620 Gm24420-201ENSMUST00000176676 59 ntBASIC11.35□□□□□ -0.59
Sec61a1P61620 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Mir7654-201ENSMUST00000185082 70 ntBASIC11.35□□□□□ -0.59
Sec61a1P61620 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.35□□□□□ -0.59
Sec61a1P61620 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Gm18307-201ENSMUST00000206864 949 ntBASIC11.35□□□□□ -0.59
Sec61a1P61620 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.35□□□□□ -0.59
Sec61a1P61620 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.35□□□□□ -0.59
Sec61a1P61620 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.35□□□□□ -0.59
Sec61a1P61620 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.35□□□□□ -0.59
Sec61a1P61620 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Sec61a1P61620 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Sec61a1P61620 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61a1P61620 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms