Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SRP54P61011 SLC7A15P-201ENST00000424028 1363 ntBASIC15.74■□□□□ 0.11
SRP54P61011 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SRP54P61011 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SRP54P61011 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 AC008741.2-201ENST00000612792 3115 ntBASIC15.73■□□□□ 0.11
SRP54P61011 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SRP54P61011 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.73■□□□□ 0.11
SRP54P61011 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.73■□□□□ 0.11
SRP54P61011 COX5BP8-201ENST00000416911 349 ntBASIC15.73■□□□□ 0.11
SRP54P61011 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.73■□□□□ 0.11
SRP54P61011 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.73■□□□□ 0.11
SRP54P61011 EEF1DP4-201ENST00000446006 880 ntBASIC15.73■□□□□ 0.11
SRP54P61011 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.73■□□□□ 0.11
SRP54P61011 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.73■□□□□ 0.11
SRP54P61011 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
SRP54P61011 AC055876.2-201ENST00000531834 546 ntBASIC15.73■□□□□ 0.11
SRP54P61011 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.73■□□□□ 0.11
SRP54P61011 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.73■□□□□ 0.11
SRP54P61011 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
SRP54P61011 AC023310.3-201ENST00000557027 670 ntBASIC15.73■□□□□ 0.11
SRP54P61011 AC100756.1-201ENST00000562736 682 ntBASIC15.73■□□□□ 0.11
SRP54P61011 AC138749.3-201ENST00000567691 622 ntBASIC15.73■□□□□ 0.11
SRP54P61011 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.73■□□□□ 0.11
SRP54P61011 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.73■□□□□ 0.11
SRP54P61011 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.73■□□□□ 0.11
SRP54P61011 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.73■□□□□ 0.11
SRP54P61011 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.73■□□□□ 0.11
SRP54P61011 AC116165.1-201ENST00000611806 668 ntBASIC15.73■□□□□ 0.11
SRP54P61011 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SRP54P61011 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.73■□□□□ 0.11
SRP54P61011 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.73■□□□□ 0.11
SRP54P61011 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.73■□□□□ 0.11
SRP54P61011 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 BNIP3P1-202ENST00000550043 1585 ntBASIC15.73■□□□□ 0.11
SRP54P61011 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SRP54P61011 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.73■□□□□ 0.11
SRP54P61011 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SRP54P61011 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRP54P61011 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 AC092850.2-201ENST00000623821 2697 ntBASIC15.72■□□□□ 0.11
SRP54P61011 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SRP54P61011 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.72■□□□□ 0.11
SRP54P61011 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.72■□□□□ 0.11
SRP54P61011 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.72■□□□□ 0.11
SRP54P61011 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SRP54P61011 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
SRP54P61011 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
SRP54P61011 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SRP54P61011 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SRP54P61011 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.72■□□□□ 0.11
SRP54P61011 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SRP54P61011 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 DGCR5-201ENST00000399539 862 ntBASIC15.72■□□□□ 0.11
SRP54P61011 HAUS4P1-201ENST00000406739 1145 ntBASIC15.72■□□□□ 0.11
SRP54P61011 AZGP1P1-201ENST00000411909 902 ntBASIC15.72■□□□□ 0.11
SRP54P61011 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.72■□□□□ 0.11
SRP54P61011 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.72■□□□□ 0.11
SRP54P61011 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.72■□□□□ 0.11
SRP54P61011 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.72■□□□□ 0.11
SRP54P61011 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.72■□□□□ 0.11
SRP54P61011 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.72■□□□□ 0.11
SRP54P61011 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.72■□□□□ 0.11
SRP54P61011 AC092337.1-201ENST00000568699 1129 ntBASIC15.72■□□□□ 0.11
SRP54P61011 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SRP54P61011 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRP54P61011 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SRP54P61011 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.72■□□□□ 0.11
SRP54P61011 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRP54P61011 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms