Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Ephb3P54754 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Ephb3P54754 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ephb3P54754 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ephb3P54754 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.45□□□□□ -0.26
Ephb3P54754 Gm11597-201ENSMUST00000121423 964 ntBASIC13.45□□□□□ -0.26
Ephb3P54754 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.45□□□□□ -0.26
Ephb3P54754 Gm24845-201ENSMUST00000158034 109 ntBASIC13.45□□□□□ -0.26
Ephb3P54754 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ephb3P54754 Gm17040-202ENSMUST00000170597 889 ntBASIC13.45□□□□□ -0.26
Ephb3P54754 Gm37666-201ENSMUST00000194110 866 ntBASIC13.45□□□□□ -0.26
Ephb3P54754 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.45□□□□□ -0.26
Ephb3P54754 Rprl1-202ENSMUST00000198476 238 ntBASIC13.45□□□□□ -0.26
Ephb3P54754 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.45□□□□□ -0.26
Ephb3P54754 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Gm45925-201ENSMUST00000218882 744 ntBASIC13.45□□□□□ -0.26
Ephb3P54754 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Gm10312-201ENSMUST00000078515 489 ntBASIC13.45□□□□□ -0.26
Ephb3P54754 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.45□□□□□ -0.26
Ephb3P54754 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.45□□□□□ -0.26
Ephb3P54754 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ephb3P54754 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ephb3P54754 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.44□□□□□ -0.26
Ephb3P54754 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.44□□□□□ -0.26
Ephb3P54754 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.44□□□□□ -0.26
Ephb3P54754 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ephb3P54754 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ephb3P54754 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Gm13813-201ENSMUST00000120998 787 ntBASIC13.44□□□□□ -0.26
Ephb3P54754 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.44□□□□□ -0.26
Ephb3P54754 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.44□□□□□ -0.26
Ephb3P54754 Gm23363-201ENSMUST00000175024 79 ntBASIC13.44□□□□□ -0.26
Ephb3P54754 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.44□□□□□ -0.26
Ephb3P54754 Gm7848-201ENSMUST00000210739 718 ntBASIC13.44□□□□□ -0.26
Ephb3P54754 Gm18730-201ENSMUST00000218038 343 ntBASIC13.44□□□□□ -0.26
Ephb3P54754 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.44□□□□□ -0.26
Ephb3P54754 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ephb3P54754 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ephb3P54754 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ephb3P54754 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ephb3P54754 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ephb3P54754 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ephb3P54754 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.43□□□□□ -0.26
Ephb3P54754 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ephb3P54754 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ephb3P54754 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.43□□□□□ -0.26
Ephb3P54754 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ephb3P54754 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ephb3P54754 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ephb3P54754 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ephb3P54754 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ephb3P54754 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ephb3P54754 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ephb3P54754 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ephb3P54754 Gm12208-201ENSMUST00000122004 163 ntBASIC13.43□□□□□ -0.26
Ephb3P54754 Gm14665-201ENSMUST00000122294 557 ntBASIC13.43□□□□□ -0.26
Ephb3P54754 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ephb3P54754 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms