Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.9□□□□□ -0.18
Nub1P54729 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.9□□□□□ -0.18
Nub1P54729 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.9□□□□□ -0.18
Nub1P54729 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nub1P54729 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nub1P54729 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nub1P54729 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.9□□□□□ -0.18
Nub1P54729 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.9□□□□□ -0.18
Nub1P54729 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nub1P54729 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nub1P54729 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nub1P54729 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nub1P54729 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Nub1P54729 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nub1P54729 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nub1P54729 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nub1P54729 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nub1P54729 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nub1P54729 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Nub1P54729 Gm13829-201ENSMUST00000119600 138 ntBASIC13.89□□□□□ -0.19
Nub1P54729 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.89□□□□□ -0.19
Nub1P54729 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nub1P54729 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.89□□□□□ -0.19
Nub1P54729 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.89□□□□□ -0.19
Nub1P54729 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nub1P54729 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.89□□□□□ -0.19
Nub1P54729 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.89□□□□□ -0.19
Nub1P54729 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nub1P54729 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.88□□□□□ -0.19
Nub1P54729 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.88□□□□□ -0.19
Nub1P54729 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nub1P54729 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Nub1P54729 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.88□□□□□ -0.19
Nub1P54729 Gm7029-201ENSMUST00000173226 450 ntBASIC13.88□□□□□ -0.19
Nub1P54729 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.88□□□□□ -0.19
Nub1P54729 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.88□□□□□ -0.19
Nub1P54729 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.88□□□□□ -0.19
Nub1P54729 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.88□□□□□ -0.19
Nub1P54729 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nub1P54729 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nub1P54729 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Nub1P54729 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nub1P54729 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nub1P54729 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nub1P54729 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nub1P54729 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nub1P54729 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nub1P54729 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nub1P54729 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nub1P54729 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nub1P54729 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nub1P54729 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nub1P54729 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms