Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.81□□□□□ -0.36
Atxn1P54254 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Atxn1P54254 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Atxn1P54254 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Gm23270-201ENSMUST00000104055 131 ntBASIC12.81□□□□□ -0.36
Atxn1P54254 Gm12363-201ENSMUST00000122250 668 ntBASIC12.81□□□□□ -0.36
Atxn1P54254 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.81□□□□□ -0.36
Atxn1P54254 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.81□□□□□ -0.36
Atxn1P54254 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Atxn1P54254 AA914427-201ENSMUST00000193194 1166 ntBASIC12.81□□□□□ -0.36
Atxn1P54254 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Atxn1P54254 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.81□□□□□ -0.36
Atxn1P54254 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.81□□□□□ -0.36
Atxn1P54254 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.81□□□□□ -0.36
Atxn1P54254 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.81□□□□□ -0.36
Atxn1P54254 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Atxn1P54254 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Atxn1P54254 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Atxn1P54254 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.8□□□□□ -0.36
Atxn1P54254 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.8□□□□□ -0.36
Atxn1P54254 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Gm8738-201ENSMUST00000172606 329 ntBASIC12.8□□□□□ -0.36
Atxn1P54254 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.8□□□□□ -0.36
Atxn1P54254 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.8□□□□□ -0.36
Atxn1P54254 Gm2445-201ENSMUST00000182798 989 ntBASIC12.8□□□□□ -0.36
Atxn1P54254 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Atxn1P54254 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.8□□□□□ -0.36
Atxn1P54254 Gm43058-201ENSMUST00000197645 625 ntBASIC12.8□□□□□ -0.36
Atxn1P54254 Gm44545-201ENSMUST00000208262 746 ntBASIC12.8□□□□□ -0.36
Atxn1P54254 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.8□□□□□ -0.36
Atxn1P54254 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.8□□□□□ -0.36
Atxn1P54254 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.8□□□□□ -0.36
Atxn1P54254 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Atxn1P54254 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Atxn1P54254 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Atxn1P54254 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atxn1P54254 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.79□□□□□ -0.36
Atxn1P54254 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Atxn1P54254 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.79□□□□□ -0.36
Atxn1P54254 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Atxn1P54254 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Atxn1P54254 Gm14665-201ENSMUST00000122294 557 ntBASIC12.79□□□□□ -0.36
Atxn1P54254 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Atxn1P54254 Gm26185-201ENSMUST00000157692 266 ntBASIC12.79□□□□□ -0.36
Atxn1P54254 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Atxn1P54254 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.79□□□□□ -0.36
Atxn1P54254 Gm5051-201ENSMUST00000204085 485 ntBASIC12.79□□□□□ -0.36
Atxn1P54254 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.79□□□□□ -0.36
Atxn1P54254 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Atxn1P54254 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atxn1P54254 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms