Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.91□□□□□ -0.5
Foxa1P35582 Gm5186-201ENSMUST00000218781 920 ntBASIC11.91□□□□□ -0.5
Foxa1P35582 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Foxa1P35582 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Foxa1P35582 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa1P35582 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Foxa1P35582 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.91□□□□□ -0.5
Foxa1P35582 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Foxa1P35582 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Foxa1P35582 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.9□□□□□ -0.5
Foxa1P35582 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.9□□□□□ -0.5
Foxa1P35582 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.9□□□□□ -0.5
Foxa1P35582 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.9□□□□□ -0.5
Foxa1P35582 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.9□□□□□ -0.5
Foxa1P35582 Gm12384-201ENSMUST00000119228 919 ntBASIC11.9□□□□□ -0.5
Foxa1P35582 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.9□□□□□ -0.5
Foxa1P35582 Mir1982-201ENSMUST00000157368 74 ntBASIC11.9□□□□□ -0.5
Foxa1P35582 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.9□□□□□ -0.5
Foxa1P35582 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.9□□□□□ -0.5
Foxa1P35582 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Foxa1P35582 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Foxa1P35582 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Foxa1P35582 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa1P35582 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Foxa1P35582 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Foxa1P35582 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.89□□□□□ -0.51
Foxa1P35582 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Foxa1P35582 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.89□□□□□ -0.51
Foxa1P35582 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Foxa1P35582 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Foxa1P35582 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Foxa1P35582 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Foxa1P35582 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.89□□□□□ -0.51
Foxa1P35582 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.89□□□□□ -0.51
Foxa1P35582 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
Foxa1P35582 Gm25857-201ENSMUST00000082788 129 ntBASIC11.89□□□□□ -0.51
Foxa1P35582 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Foxa1P35582 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.89□□□□□ -0.51
Foxa1P35582 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Foxa1P35582 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Foxa1P35582 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.89□□□□□ -0.51
Foxa1P35582 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Foxa1P35582 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Foxa1P35582 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.88□□□□□ -0.51
Foxa1P35582 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Foxa1P35582 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms