Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
RxrbP28704 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RxrbP28704 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.93□□□□□ -0.34
RxrbP28704 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
RxrbP28704 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RxrbP28704 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.93□□□□□ -0.34
RxrbP28704 Mir8102-201ENSMUST00000184148 139 ntBASIC12.93□□□□□ -0.34
RxrbP28704 Gm27989-201ENSMUST00000184721 107 ntBASIC12.93□□□□□ -0.34
RxrbP28704 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.93□□□□□ -0.34
RxrbP28704 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RxrbP28704 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RxrbP28704 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.92□□□□□ -0.34
RxrbP28704 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.92□□□□□ -0.34
RxrbP28704 Gm15920-201ENSMUST00000118998 402 ntBASIC12.92□□□□□ -0.34
RxrbP28704 Gm11978-201ENSMUST00000122315 466 ntBASIC12.92□□□□□ -0.34
RxrbP28704 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.92□□□□□ -0.34
RxrbP28704 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.92□□□□□ -0.34
RxrbP28704 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.92□□□□□ -0.34
RxrbP28704 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RxrbP28704 Gm9522-201ENSMUST00000182394 926 ntBASIC12.92□□□□□ -0.34
RxrbP28704 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
RxrbP28704 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
RxrbP28704 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.92□□□□□ -0.34
RxrbP28704 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Gm20445-201ENSMUST00000061905 565 ntBASIC12.92□□□□□ -0.34
RxrbP28704 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
RxrbP28704 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
RxrbP28704 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RxrbP28704 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RxrbP28704 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
RxrbP28704 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RxrbP28704 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RxrbP28704 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RxrbP28704 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RxrbP28704 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RxrbP28704 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RxrbP28704 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
RxrbP28704 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RxrbP28704 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RxrbP28704 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RxrbP28704 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RxrbP28704 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
RxrbP28704 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RxrbP28704 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.91□□□□□ -0.34
RxrbP28704 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.91□□□□□ -0.34
RxrbP28704 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.91□□□□□ -0.34
RxrbP28704 Gm13813-201ENSMUST00000120998 787 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms