Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.09□□□□□ -0.47
Clk1P22518 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Clk1P22518 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Clk1P22518 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Gm13689-201ENSMUST00000119360 685 ntBASIC12.09□□□□□ -0.47
Clk1P22518 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.09□□□□□ -0.47
Clk1P22518 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.09□□□□□ -0.47
Clk1P22518 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.09□□□□□ -0.47
Clk1P22518 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.09□□□□□ -0.47
Clk1P22518 Gm18473-201ENSMUST00000220543 868 ntBASIC12.09□□□□□ -0.47
Clk1P22518 Itm2b-204ENSMUST00000228637 783 ntBASIC12.09□□□□□ -0.47
Clk1P22518 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.09□□□□□ -0.47
Clk1P22518 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Clk1P22518 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clk1P22518 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Clk1P22518 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.08□□□□□ -0.47
Clk1P22518 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Clk1P22518 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Clk1P22518 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Clk1P22518 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.08□□□□□ -0.48
Clk1P22518 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Clk1P22518 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Gm28911-201ENSMUST00000188837 117 ntBASIC12.08□□□□□ -0.48
Clk1P22518 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.08□□□□□ -0.48
Clk1P22518 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Clk1P22518 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Clk1P22518 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Clk1P22518 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.08□□□□□ -0.48
Clk1P22518 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Clk1P22518 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.08□□□□□ -0.48
Clk1P22518 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clk1P22518 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.07□□□□□ -0.48
Clk1P22518 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Clk1P22518 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.07□□□□□ -0.48
Clk1P22518 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.07□□□□□ -0.48
Clk1P22518 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Clk1P22518 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Clk1P22518 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.07□□□□□ -0.48
Clk1P22518 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.07□□□□□ -0.48
Clk1P22518 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.07□□□□□ -0.48
Clk1P22518 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.07□□□□□ -0.48
Clk1P22518 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clk1P22518 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms