Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.68□□□□□ -0.38
Hoxa4P06798 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.68□□□□□ -0.38
Hoxa4P06798 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hoxa4P06798 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Hoxa4P06798 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.67□□□□□ -0.38
Hoxa4P06798 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.67□□□□□ -0.38
Hoxa4P06798 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.67□□□□□ -0.38
Hoxa4P06798 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Gm13786-201ENSMUST00000122371 333 ntBASIC12.67□□□□□ -0.38
Hoxa4P06798 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Gm38158-201ENSMUST00000194617 339 ntBASIC12.67□□□□□ -0.38
Hoxa4P06798 Gm6013-201ENSMUST00000212264 699 ntBASIC12.67□□□□□ -0.38
Hoxa4P06798 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Hoxa4P06798 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Hoxa4P06798 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.67□□□□□ -0.38
Hoxa4P06798 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.67□□□□□ -0.38
Hoxa4P06798 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.67□□□□□ -0.38
Hoxa4P06798 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa4P06798 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hoxa4P06798 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.66□□□□□ -0.38
Hoxa4P06798 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Daam2-202ENSMUST00000224595 1926 ntBASIC12.66□□□□□ -0.38
Hoxa4P06798 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Hoxa4P06798 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hoxa4P06798 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Gm11793-201ENSMUST00000120433 981 ntBASIC12.66□□□□□ -0.38
Hoxa4P06798 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.66□□□□□ -0.38
Hoxa4P06798 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hoxa4P06798 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.66□□□□□ -0.38
Hoxa4P06798 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.66□□□□□ -0.38
Hoxa4P06798 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.66□□□□□ -0.38
Hoxa4P06798 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Hoxa4P06798 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.66□□□□□ -0.38
Hoxa4P06798 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hoxa4P06798 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hoxa4P06798 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa4P06798 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.65□□□□□ -0.38
Hoxa4P06798 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa4P06798 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa4P06798 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa4P06798 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa4P06798 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa4P06798 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa4P06798 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa4P06798 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxa4P06798 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxa4P06798 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa4P06798 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa4P06798 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa4P06798 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms