Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.44□□□□□ -0.74
P06323 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.44□□□□□ -0.74
P06323 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.44□□□□□ -0.74
P06323 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.44□□□□□ -0.74
P06323 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.44□□□□□ -0.74
P06323 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.44□□□□□ -0.74
P06323 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.44□□□□□ -0.74
P06323 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
P06323 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.44□□□□□ -0.74
P06323 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.44□□□□□ -0.74
P06323 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.44□□□□□ -0.74
P06323 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P06323 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.43□□□□□ -0.74
P06323 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.43□□□□□ -0.74
P06323 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
P06323 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
P06323 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
P06323 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.43□□□□□ -0.74
P06323 Gm16215-201ENSMUST00000161990 637 ntBASIC10.43□□□□□ -0.74
P06323 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
P06323 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.43□□□□□ -0.74
P06323 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.43□□□□□ -0.74
P06323 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.43□□□□□ -0.74
P06323 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
P06323 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.43□□□□□ -0.74
P06323 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
P06323 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.43□□□□□ -0.74
P06323 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.43□□□□□ -0.74
P06323 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
P06323 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
P06323 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P06323 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P06323 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P06323 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
P06323 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.42□□□□□ -0.74
P06323 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P06323 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
P06323 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P06323 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
P06323 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.42□□□□□ -0.74
P06323 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P06323 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P06323 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P06323 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.42□□□□□ -0.74
P06323 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.42□□□□□ -0.74
P06323 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P06323 Gm6447-201ENSMUST00000118905 835 ntBASIC10.42□□□□□ -0.74
P06323 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.42□□□□□ -0.74
P06323 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.42□□□□□ -0.74
P06323 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P06323 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC10.42□□□□□ -0.74
P06323 Gm20949-201ENSMUST00000206478 952 ntBASIC10.42□□□□□ -0.74
P06323 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.42□□□□□ -0.74
P06323 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P06323 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.42□□□□□ -0.74
P06323 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.42□□□□□ -0.74
P06323 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P06323 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms