Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Gm13385-201ENSMUST00000121089 220 ntBASIC8.13□□□□□ -1.11
P06320 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC8.13□□□□□ -1.11
P06320 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC8.13□□□□□ -1.11
P06320 Gm9719-201ENSMUST00000162765 543 ntBASIC8.13□□□□□ -1.11
P06320 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC8.13□□□□□ -1.11
P06320 Mir8117-201ENSMUST00000184773 107 ntBASIC8.13□□□□□ -1.11
P06320 Gm21470-201ENSMUST00000187680 696 ntBASIC8.13□□□□□ -1.11
P06320 Gm17971-201ENSMUST00000190239 806 ntBASIC8.13□□□□□ -1.11
P06320 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC8.13□□□□□ -1.11
P06320 AC154806.6-201ENSMUST00000228192 202 ntBASIC8.13□□□□□ -1.11
P06320 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC8.13□□□□□ -1.11
P06320 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
P06320 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC8.13□□□□□ -1.11
P06320 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC8.13□□□□□ -1.11
P06320 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
P06320 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
P06320 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Gm29100-201ENSMUST00000187564 4410 ntBASIC8.13□□□□□ -1.11
P06320 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
P06320 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
P06320 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC8.12□□□□□ -1.11
P06320 Nrn1-204ENSMUST00000224323 1779 ntBASIC8.12□□□□□ -1.11
P06320 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC8.12□□□□□ -1.11
P06320 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
P06320 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC8.12□□□□□ -1.11
P06320 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 AC154404.1-201ENSMUST00000223601 2077 ntBASIC8.12□□□□□ -1.11
P06320 Gm40377-201ENSMUST00000204604 2015 ntBASIC8.12□□□□□ -1.11
P06320 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
P06320 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
P06320 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
P06320 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC8.12□□□□□ -1.11
P06320 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC8.12□□□□□ -1.11
P06320 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Dupd1-202ENSMUST00000224735 548 ntBASIC8.12□□□□□ -1.11
P06320 Psmb5-202ENSMUST00000227257 622 ntBASIC8.12□□□□□ -1.11
P06320 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Gm5466-201ENSMUST00000119395 1890 ntBASIC8.12□□□□□ -1.11
P06320 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC8.12□□□□□ -1.11
P06320 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC8.12□□□□□ -1.11
P06320 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
P06320 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Gm43045-201ENSMUST00000198725 2095 ntBASIC8.12□□□□□ -1.11
P06320 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC8.12□□□□□ -1.11
P06320 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC8.12□□□□□ -1.11
P06320 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Gm44806-201ENSMUST00000205574 2303 ntBASIC8.12□□□□□ -1.11
P06320 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Gm13859-201ENSMUST00000119936 1423 ntBASIC8.12□□□□□ -1.11
P06320 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
P06320 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms