Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.15□□□□□ -0.47
Matn4O89029 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Matn4O89029 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.14□□□□□ -0.47
Matn4O89029 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn4O89029 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.14□□□□□ -0.47
Matn4O89029 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn4O89029 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn4O89029 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn4O89029 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Matn4O89029 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn4O89029 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn4O89029 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Matn4O89029 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn4O89029 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn4O89029 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn4O89029 Gm12341-201ENSMUST00000119724 503 ntBASIC12.14□□□□□ -0.47
Matn4O89029 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.14□□□□□ -0.47
Matn4O89029 Gm19184-201ENSMUST00000196798 928 ntBASIC12.14□□□□□ -0.47
Matn4O89029 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.14□□□□□ -0.47
Matn4O89029 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Matn4O89029 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn4O89029 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn4O89029 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Matn4O89029 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.14□□□□□ -0.47
Matn4O89029 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Matn4O89029 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.14□□□□□ -0.47
Matn4O89029 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.14□□□□□ -0.47
Matn4O89029 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Matn4O89029 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn4O89029 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Matn4O89029 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Matn4O89029 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.13□□□□□ -0.47
Matn4O89029 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Matn4O89029 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Matn4O89029 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Matn4O89029 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Matn4O89029 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.13□□□□□ -0.47
Matn4O89029 Gm28693-202ENSMUST00000190758 331 ntBASIC12.13□□□□□ -0.47
Matn4O89029 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.13□□□□□ -0.47
Matn4O89029 Gm18307-201ENSMUST00000206864 949 ntBASIC12.13□□□□□ -0.47
Matn4O89029 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.13□□□□□ -0.47
Matn4O89029 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Matn4O89029 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.13□□□□□ -0.47
Matn4O89029 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.13□□□□□ -0.47
Matn4O89029 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.13□□□□□ -0.47
Matn4O89029 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.13□□□□□ -0.47
Matn4O89029 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.13□□□□□ -0.47
Matn4O89029 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Matn4O89029 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn4O89029 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.12□□□□□ -0.47
Matn4O89029 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.12□□□□□ -0.47
Matn4O89029 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.12□□□□□ -0.47
Matn4O89029 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.12□□□□□ -0.47
Matn4O89029 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn4O89029 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Matn4O89029 Gm10576-201ENSMUST00000191927 825 ntBASIC12.12□□□□□ -0.47
Matn4O89029 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.12□□□□□ -0.47
Matn4O89029 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.12□□□□□ -0.47
Matn4O89029 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.12□□□□□ -0.47
Matn4O89029 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms