Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Syn1O88935 Daam2-202ENSMUST00000224595 1926 ntBASIC13.25□□□□□ -0.29
Syn1O88935 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syn1O88935 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syn1O88935 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syn1O88935 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Syn1O88935 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Syn1O88935 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.24□□□□□ -0.29
Syn1O88935 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.24□□□□□ -0.29
Syn1O88935 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Syn1O88935 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.24□□□□□ -0.29
Syn1O88935 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.24□□□□□ -0.29
Syn1O88935 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Syn1O88935 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.24□□□□□ -0.29
Syn1O88935 Gm14460-201ENSMUST00000121511 639 ntBASIC13.24□□□□□ -0.29
Syn1O88935 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.24□□□□□ -0.29
Syn1O88935 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.24□□□□□ -0.29
Syn1O88935 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Syn1O88935 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.24□□□□□ -0.29
Syn1O88935 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.24□□□□□ -0.29
Syn1O88935 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.24□□□□□ -0.29
Syn1O88935 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.24□□□□□ -0.29
Syn1O88935 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.24□□□□□ -0.29
Syn1O88935 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Syn1O88935 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.24□□□□□ -0.29
Syn1O88935 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.24□□□□□ -0.29
Syn1O88935 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syn1O88935 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Syn1O88935 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Syn1O88935 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Syn1O88935 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Syn1O88935 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Syn1O88935 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Syn1O88935 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.23□□□□□ -0.29
Syn1O88935 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Syn1O88935 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.23□□□□□ -0.29
Syn1O88935 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.23□□□□□ -0.29
Syn1O88935 Gm12165-201ENSMUST00000117047 342 ntBASIC13.23□□□□□ -0.29
Syn1O88935 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.23□□□□□ -0.29
Syn1O88935 Gm19287-201ENSMUST00000203190 358 ntBASIC13.23□□□□□ -0.29
Syn1O88935 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.23□□□□□ -0.29
Syn1O88935 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.23□□□□□ -0.29
Syn1O88935 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.23□□□□□ -0.29
Syn1O88935 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.23□□□□□ -0.29
Syn1O88935 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.23□□□□□ -0.29
Syn1O88935 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.23□□□□□ -0.29
Syn1O88935 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.23□□□□□ -0.29
Syn1O88935 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syn1O88935 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Syn1O88935 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.22□□□□□ -0.29
Syn1O88935 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syn1O88935 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Syn1O88935 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.22□□□□□ -0.29
Syn1O88935 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms