Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.64□□□□□ -0.39
ClppO88696 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.64□□□□□ -0.39
ClppO88696 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ClppO88696 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ClppO88696 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
ClppO88696 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
ClppO88696 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.64□□□□□ -0.39
ClppO88696 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.64□□□□□ -0.39
ClppO88696 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
ClppO88696 Mir6420-201ENSMUST00000185032 102 ntBASIC12.64□□□□□ -0.39
ClppO88696 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.64□□□□□ -0.39
ClppO88696 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.64□□□□□ -0.39
ClppO88696 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.64□□□□□ -0.39
ClppO88696 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.64□□□□□ -0.39
ClppO88696 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
ClppO88696 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ClppO88696 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
ClppO88696 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ClppO88696 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.64□□□□□ -0.39
ClppO88696 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ClppO88696 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.64□□□□□ -0.39
ClppO88696 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.64□□□□□ -0.39
ClppO88696 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.64□□□□□ -0.39
ClppO88696 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClppO88696 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.63□□□□□ -0.39
ClppO88696 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.63□□□□□ -0.39
ClppO88696 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ClppO88696 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.63□□□□□ -0.39
ClppO88696 Mir1247-201ENSMUST00000116706 82 ntBASIC12.63□□□□□ -0.39
ClppO88696 Gm15198-201ENSMUST00000117283 177 ntBASIC12.63□□□□□ -0.39
ClppO88696 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.63□□□□□ -0.39
ClppO88696 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.63□□□□□ -0.39
ClppO88696 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.63□□□□□ -0.39
ClppO88696 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.63□□□□□ -0.39
ClppO88696 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.63□□□□□ -0.39
ClppO88696 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.63□□□□□ -0.39
ClppO88696 Gm19309-201ENSMUST00000218295 205 ntBASIC12.63□□□□□ -0.39
ClppO88696 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.63□□□□□ -0.39
ClppO88696 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
ClppO88696 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.63□□□□□ -0.39
ClppO88696 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClppO88696 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms