Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.41□□□□□ -0.26
Ttc3O88196 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ttc3O88196 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ttc3O88196 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ttc3O88196 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ttc3O88196 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ttc3O88196 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ttc3O88196 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.4□□□□□ -0.26
Ttc3O88196 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.4□□□□□ -0.26
Ttc3O88196 Gm45925-201ENSMUST00000218882 744 ntBASIC13.4□□□□□ -0.26
Ttc3O88196 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.4□□□□□ -0.26
Ttc3O88196 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.4□□□□□ -0.26
Ttc3O88196 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.4□□□□□ -0.26
Ttc3O88196 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.4□□□□□ -0.26
Ttc3O88196 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.4□□□□□ -0.26
Ttc3O88196 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ttc3O88196 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.4□□□□□ -0.27
Ttc3O88196 Gm14017-201ENSMUST00000121934 386 ntBASIC13.4□□□□□ -0.27
Ttc3O88196 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.4□□□□□ -0.27
Ttc3O88196 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.4□□□□□ -0.27
Ttc3O88196 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Ttc3O88196 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ttc3O88196 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ttc3O88196 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ttc3O88196 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ttc3O88196 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.39□□□□□ -0.27
Ttc3O88196 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Gm7857-201ENSMUST00000117957 358 ntBASIC13.39□□□□□ -0.27
Ttc3O88196 Gm12058-201ENSMUST00000118614 437 ntBASIC13.39□□□□□ -0.27
Ttc3O88196 Gm14832-201ENSMUST00000121289 322 ntBASIC13.39□□□□□ -0.27
Ttc3O88196 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Mir5120-201ENSMUST00000175020 78 ntBASIC13.39□□□□□ -0.27
Ttc3O88196 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Gm42937-201ENSMUST00000197360 752 ntBASIC13.39□□□□□ -0.27
Ttc3O88196 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ttc3O88196 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ttc3O88196 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Ttc3O88196 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ttc3O88196 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ttc3O88196 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ttc3O88196 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ttc3O88196 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.39□□□□□ -0.27
Ttc3O88196 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ttc3O88196 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ttc3O88196 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.38□□□□□ -0.27
Ttc3O88196 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms