Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lsm2O35900 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Gm11524-201ENSMUST00000119349 807 ntBASIC11.44□□□□□ -0.58
Lsm2O35900 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.44□□□□□ -0.58
Lsm2O35900 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Gm27618-201ENSMUST00000183671 60 ntBASIC11.44□□□□□ -0.58
Lsm2O35900 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.44□□□□□ -0.58
Lsm2O35900 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Lsm2O35900 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.44□□□□□ -0.58
Lsm2O35900 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.44□□□□□ -0.58
Lsm2O35900 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.44□□□□□ -0.58
Lsm2O35900 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lsm2O35900 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lsm2O35900 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm2O35900 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lsm2O35900 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.43□□□□□ -0.58
Lsm2O35900 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.43□□□□□ -0.58
Lsm2O35900 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.43□□□□□ -0.58
Lsm2O35900 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.43□□□□□ -0.58
Lsm2O35900 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Gm7775-201ENSMUST00000218871 853 ntBASIC11.43□□□□□ -0.58
Lsm2O35900 Gm8227-201ENSMUST00000223306 571 ntBASIC11.43□□□□□ -0.58
Lsm2O35900 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Lsm2O35900 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lsm2O35900 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.43□□□□□ -0.58
Lsm2O35900 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Lsm2O35900 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm2O35900 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lsm2O35900 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm2O35900 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm2O35900 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm2O35900 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm2O35900 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Lsm2O35900 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm2O35900 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lsm2O35900 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm2O35900 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Lsm2O35900 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Lsm2O35900 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm2O35900 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm2O35900 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm2O35900 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm2O35900 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm2O35900 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Lsm2O35900 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.42□□□□□ -0.58
Lsm2O35900 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm2O35900 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm2O35900 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.42□□□□□ -0.58
Lsm2O35900 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm2O35900 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.42□□□□□ -0.58
Lsm2O35900 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm2O35900 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms