Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Gm43179-201ENSMUST00000198797 275 ntBASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Gm5904-201ENSMUST00000210286 865 ntBASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Gm11964-201ENSMUST00000120982 444 ntBASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb9E9Q5G2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Gm9368-201ENSMUST00000219348 831 ntBASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Morn2-202ENSMUST00000227729 656 ntBASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb9E9Q5G2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Gm4986-201ENSMUST00000119731 549 ntBASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.09■□□□□ 0.01
Pcdhb9E9Q5G2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms