Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cpsf4lE9Q2N0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.9□□□□□ -0.67
Cpsf4lE9Q2N0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cpsf4lE9Q2N0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cpsf4lE9Q2N0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cpsf4lE9Q2N0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Gm14921-201ENSMUST00000118643 908 ntBASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Gm25857-201ENSMUST00000082788 129 ntBASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cpsf4lE9Q2N0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms