Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Gm8584-201ENSMUST00000171982 758 ntBASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Gm42937-201ENSMUST00000197360 752 ntBASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a3E9PWQ3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Gm17936-201ENSMUST00000199413 988 ntBASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Gm13263-201ENSMUST00000121271 838 ntBASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Gm34379-201ENSMUST00000195036 290 ntBASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Gm25677-201ENSMUST00000174983 72 ntBASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Gm24809-201ENSMUST00000175318 271 ntBASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.49□□□□□ -0.41
Col6a3E9PWQ3 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Gm11544-201ENSMUST00000120215 382 ntBASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Gm42816-201ENSMUST00000198433 325 ntBASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Gm12579-201ENSMUST00000118040 783 ntBASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Gm12345-201ENSMUST00000119288 898 ntBASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Gm33707-201ENSMUST00000195135 569 ntBASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms