Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5-4A0A075B652 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Gm6447-201ENSMUST00000118905 835 ntBASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Mir6977-201ENSMUST00000184960 64 ntBASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms