Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.49□□□□□ -0.57
Nubp2Q9R061 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nubp2Q9R061 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nubp2Q9R061 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.48□□□□□ -0.57
Nubp2Q9R061 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Gm13612-201ENSMUST00000119276 390 ntBASIC11.48□□□□□ -0.57
Nubp2Q9R061 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Gm27847-201ENSMUST00000183711 107 ntBASIC11.48□□□□□ -0.57
Nubp2Q9R061 Gm27375-201ENSMUST00000183799 107 ntBASIC11.48□□□□□ -0.57
Nubp2Q9R061 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.48□□□□□ -0.57
Nubp2Q9R061 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.48□□□□□ -0.57
Nubp2Q9R061 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nubp2Q9R061 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.47□□□□□ -0.57
Nubp2Q9R061 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Gm8652-201ENSMUST00000181363 964 ntBASIC11.47□□□□□ -0.57
Nubp2Q9R061 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Gm43438-201ENSMUST00000198133 379 ntBASIC11.47□□□□□ -0.57
Nubp2Q9R061 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.47□□□□□ -0.57
Nubp2Q9R061 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.47□□□□□ -0.57
Nubp2Q9R061 Gm18473-201ENSMUST00000220543 868 ntBASIC11.47□□□□□ -0.57
Nubp2Q9R061 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.47□□□□□ -0.57
Nubp2Q9R061 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nubp2Q9R061 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nubp2Q9R061 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms