Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Gm6912-201ENSMUST00000117218 544 ntBASIC13.04□□□□□ -0.32
Sf3a3Q9D554 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.04□□□□□ -0.32
Sf3a3Q9D554 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3a3Q9D554 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Gm5566-201ENSMUST00000116118 459 ntBASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Mir3113-201ENSMUST00000175478 76 ntBASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Gm29541-201ENSMUST00000191351 678 ntBASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Gm16476-201ENSMUST00000221544 139 ntBASIC13.03□□□□□ -0.32
Sf3a3Q9D554 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3a3Q9D554 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.03□□□□□ -0.32
Sf3a3Q9D554 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sf3a3Q9D554 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.02□□□□□ -0.32
Sf3a3Q9D554 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Sf3a3Q9D554 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sf3a3Q9D554 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sf3a3Q9D554 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Sf3a3Q9D554 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3a3Q9D554 Map1b-203ENSMUST00000223725 2669 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms