Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Syt7-205ENSMUST00000224135 1557 ntBASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Gm15920-201ENSMUST00000118998 402 ntBASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Gm15321-201ENSMUST00000121290 288 ntBASIC14.06□□□□□ -0.16
Ssr1Q9CY50 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Gm26464-201ENSMUST00000157094 305 ntBASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Gm16215-201ENSMUST00000161990 637 ntBASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Mir7023-201ENSMUST00000185093 64 ntBASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Gm38144-201ENSMUST00000192790 465 ntBASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Gm7730-201ENSMUST00000212486 454 ntBASIC14.06□□□□□ -0.16
Ssr1Q9CY50 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssr1Q9CY50 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Gm42550-201ENSMUST00000201553 960 ntBASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssr1Q9CY50 CT009713.5-203ENSMUST00000224218 2079 ntBASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Gm43860-201ENSMUST00000201742 2705 ntBASIC14.05□□□□□ -0.16
Ssr1Q9CY50 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms