Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.52□□□□□ -0.4
Rnf111Q99ML9 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf111Q99ML9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf111Q99ML9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf111Q99ML9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Rnf111Q99ML9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Rnf111Q99ML9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf111Q99ML9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf111Q99ML9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf111Q99ML9 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.52□□□□□ -0.4
Rnf111Q99ML9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf111Q99ML9 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Gm14928-201ENSMUST00000120198 477 ntBASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Gm15429-201ENSMUST00000151268 798 ntBASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Gm8515-201ENSMUST00000194852 576 ntBASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf111Q99ML9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Gm6983-201ENSMUST00000214912 628 ntBASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Gm6180-201ENSMUST00000065243 498 ntBASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Gm26315-201ENSMUST00000083890 321 ntBASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf111Q99ML9 Daam2-202ENSMUST00000224595 1926 ntBASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms