Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Gm27438-201ENSMUST00000183480 110 ntBASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Gm45224-201ENSMUST00000208203 414 ntBASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Gm11628-201ENSMUST00000117568 171 ntBASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Gm12058-201ENSMUST00000118614 437 ntBASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Gm13492-201ENSMUST00000119772 665 ntBASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.1□□□□□ -0.47
Nkx6-1Q99MA9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Gm23699-201ENSMUST00000158835 135 ntBASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Gm27552-201ENSMUST00000183351 62 ntBASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Gm27844-201ENSMUST00000183613 62 ntBASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Gm45433-201ENSMUST00000209386 247 ntBASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Gm8913-201ENSMUST00000209491 641 ntBASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms