Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Mir1894-201ENSMUST00000122802 81 ntBASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Gm27892-201ENSMUST00000185017 106 ntBASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.48□□□□□ -0.41
Vmp1Q99KU0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vmp1Q99KU0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.47□□□□□ -0.41
Vmp1Q99KU0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Gm12403-201ENSMUST00000121384 959 ntBASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.47□□□□□ -0.41
Vmp1Q99KU0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Gm37057-201ENSMUST00000192624 1916 ntBASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vmp1Q99KU0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Vmp1Q99KU0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms