Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.77□□□□□ -0.37
Vsx1Q91V10 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.76□□□□□ -0.37
Vsx1Q91V10 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.76□□□□□ -0.37
Vsx1Q91V10 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Gm17208-201ENSMUST00000168388 535 ntBASIC12.76□□□□□ -0.37
Vsx1Q91V10 Gm27438-201ENSMUST00000183480 110 ntBASIC12.76□□□□□ -0.37
Vsx1Q91V10 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Gm8885-201ENSMUST00000189382 598 ntBASIC12.76□□□□□ -0.37
Vsx1Q91V10 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.76□□□□□ -0.37
Vsx1Q91V10 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.76□□□□□ -0.37
Vsx1Q91V10 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Gm8385-201ENSMUST00000058999 643 ntBASIC12.76□□□□□ -0.37
Vsx1Q91V10 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vsx1Q91V10 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.76□□□□□ -0.37
Vsx1Q91V10 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx1Q91V10 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Gm26361-201ENSMUST00000158868 186 ntBASIC12.75□□□□□ -0.37
Vsx1Q91V10 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Gm25700-201ENSMUST00000177693 110 ntBASIC12.75□□□□□ -0.37
Vsx1Q91V10 Gm3508-201ENSMUST00000186012 792 ntBASIC12.75□□□□□ -0.37
Vsx1Q91V10 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.75□□□□□ -0.37
Vsx1Q91V10 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx1Q91V10 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms