Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Gm13813-201ENSMUST00000120998 787 ntBASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Gm28693-202ENSMUST00000190758 331 ntBASIC12.37□□□□□ -0.43
Lsm1Q8VC85 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.37□□□□□ -0.43
Lsm1Q8VC85 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Gm15823-201ENSMUST00000064305 670 ntBASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm1Q8VC85 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Gm27437-201ENSMUST00000183429 107 ntBASIC12.36□□□□□ -0.43
Lsm1Q8VC85 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.36□□□□□ -0.43
Lsm1Q8VC85 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Paupar-201ENSMUST00000194826 3482 ntBASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.36□□□□□ -0.43
Lsm1Q8VC85 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Gm12928-201ENSMUST00000117115 573 ntBASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Gm12291-201ENSMUST00000121627 311 ntBASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Gm8463-201ENSMUST00000208573 613 ntBASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Gm45668-201ENSMUST00000211271 493 ntBASIC12.35□□□□□ -0.43
Lsm1Q8VC85 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms