Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Mir686-201ENSMUST00000102174 109 ntBASIC12.17□□□□□ -0.46
Clrn1Q8K445 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.17□□□□□ -0.46
Clrn1Q8K445 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.17□□□□□ -0.46
Clrn1Q8K445 Gm26185-201ENSMUST00000157692 266 ntBASIC12.17□□□□□ -0.46
Clrn1Q8K445 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Gm27331-201ENSMUST00000183705 60 ntBASIC12.17□□□□□ -0.46
Clrn1Q8K445 Gm29649-201ENSMUST00000185649 419 ntBASIC12.17□□□□□ -0.46
Clrn1Q8K445 Gm37497-201ENSMUST00000195830 798 ntBASIC12.17□□□□□ -0.46
Clrn1Q8K445 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.17□□□□□ -0.46
Clrn1Q8K445 Gm29705-201ENSMUST00000212598 474 ntBASIC12.17□□□□□ -0.46
Clrn1Q8K445 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.17□□□□□ -0.46
Clrn1Q8K445 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Gm10146-201ENSMUST00000072739 309 ntBASIC12.17□□□□□ -0.46
Clrn1Q8K445 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Clrn1Q8K445 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn1Q8K445 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.16□□□□□ -0.46
Clrn1Q8K445 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.16□□□□□ -0.46
Clrn1Q8K445 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.16□□□□□ -0.46
Clrn1Q8K445 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Gm7561-201ENSMUST00000211203 886 ntBASIC12.16□□□□□ -0.46
Clrn1Q8K445 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn1Q8K445 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.15□□□□□ -0.46
Clrn1Q8K445 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn1Q8K445 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms