Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim68Q8K243 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim68Q8K243 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim68Q8K243 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Trim68Q8K243 Gm8805-201ENSMUST00000117848 313 ntBASIC14.03□□□□□ -0.16
Trim68Q8K243 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim68Q8K243 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim68Q8K243 Gm22902-201ENSMUST00000158488 302 ntBASIC14.03□□□□□ -0.16
Trim68Q8K243 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim68Q8K243 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.03□□□□□ -0.16
Trim68Q8K243 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Trim68Q8K243 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim68Q8K243 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim68Q8K243 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim68Q8K243 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim68Q8K243 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim68Q8K243 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim68Q8K243 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim68Q8K243 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim68Q8K243 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim68Q8K243 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trim68Q8K243 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim68Q8K243 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim68Q8K243 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim68Q8K243 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.03□□□□□ -0.16
Trim68Q8K243 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim68Q8K243 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim68Q8K243 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim68Q8K243 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim68Q8K243 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim68Q8K243 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim68Q8K243 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim68Q8K243 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim68Q8K243 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim68Q8K243 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim68Q8K243 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim68Q8K243 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim68Q8K243 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim68Q8K243 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim68Q8K243 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim68Q8K243 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim68Q8K243 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Trim68Q8K243 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Trim68Q8K243 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim68Q8K243 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim68Q8K243 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim68Q8K243 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim68Q8K243 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim68Q8K243 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.02□□□□□ -0.17
Trim68Q8K243 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.02□□□□□ -0.17
Trim68Q8K243 Gm21769-201ENSMUST00000211922 111 ntBASIC14.02□□□□□ -0.17
Trim68Q8K243 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.02□□□□□ -0.17
Trim68Q8K243 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim68Q8K243 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim68Q8K243 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim68Q8K243 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim68Q8K243 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim68Q8K243 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim68Q8K243 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim68Q8K243 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim68Q8K243 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim68Q8K243 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.02□□□□□ -0.17
Trim68Q8K243 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim68Q8K243 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.01□□□□□ -0.17
Trim68Q8K243 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim68Q8K243 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.01□□□□□ -0.17
Trim68Q8K243 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim68Q8K243 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim68Q8K243 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim68Q8K243 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim68Q8K243 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim68Q8K243 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim68Q8K243 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim68Q8K243 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim68Q8K243 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim68Q8K243 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Trim68Q8K243 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim68Q8K243 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim68Q8K243 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim68Q8K243 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim68Q8K243 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim68Q8K243 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Trim68Q8K243 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim68Q8K243 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms