Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Gm42627-201ENSMUST00000197347 224 ntBASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 CT009764.1-201ENSMUST00000222260 483 ntBASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Gm38092-201ENSMUST00000195600 653 ntBASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Gm8099-201ENSMUST00000200510 742 ntBASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Gm10608-202ENSMUST00000213924 676 ntBASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim47Q8C0E3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Olfr284-202ENSMUST00000206647 966 ntBASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Mir339-201ENSMUST00000083659 96 ntBASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim47Q8C0E3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms